Ronan O'Malley, PhD

Mechanically induced localisation of SECONDARY WALL INTERACTING bZIP is associated with thigmomorphogenic and secondary cell wall gene expression.
Mechanically induced localisation of SECONDARY WALL INTERACTING bZIP is associated with thigmomorphogenic and secondary cell wall gene expression. Quant Plant Biol. 2024; 5:e5.
PMID: 38774130

Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis.
Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis. Nat Plants. 2024 04; 10(4):673-688.
PMID: 38589485

Shoring up the base: the development and regulation of cortical sclerenchyma in grass nodal roots.
Shoring up the base: the development and regulation of cortical sclerenchyma in grass nodal roots. bioRxiv. 2024 Jan 29.
PMID: 38352548

Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination.
Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination. Plant Direct. 2023 Nov; 7(11):e3546.
PMID: 38028649

Integrating chromatin conformation information in a self-supervised learning model improves metagenome binning.
Integrating chromatin conformation information in a self-supervised learning model improves metagenome binning. PeerJ. 2023; 11:e16129.
PMID: 37753177

Transcriptome and DNA methylome divergence of inflorescence development between 2 ecotypes in Panicum hallii.
Transcriptome and DNA methylome divergence of inflorescence development between 2 ecotypes in Panicum hallii. Plant Physiol. 2023 07 03; 192(3):2374-2393.
PMID: 37018475

Author Correction: CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping.
Author Correction: CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Nat Methods. 2023 Mar; 20(3):469.
PMID: 36690743

High-throughput identification of novel heat tolerance genes via genome-wide pooled mutant screens in the model green alga Chlamydomonas reinhardtii.
High-throughput identification of novel heat tolerance genes via genome-wide pooled mutant screens in the model green alga Chlamydomonas reinhardtii. Plant Cell Environ. 2023 03; 46(3):865-888.
PMID: 36479703

Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass.
Genome of Paspalum vaginatum and the role of trehalose mediated autophagy in increasing maize biomass. Nat Commun. 2022 12 13; 13(1):7731.
PMID: 36513676

The landscape of Chlamydomonas histone H3 lysine 4 methylation reveals both constant features and dynamic changes during the diurnal cycle.
The landscape of Chlamydomonas histone H3 lysine 4 methylation reveals both constant features and dynamic changes during the diurnal cycle. Plant J. 2022 10; 112(2):352-368.
PMID: 35986497

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