2020 Student Publications

Allocco, Jennifer B., and Maria-Luisa Alegre. "Exploiting Immunometabolism and T Cell Function for Solid Organ Transplantation." Cellular Immunology 351 (May 1, 2020): 104068. https://doi.org/10.1016/j.cellimm.2020.104068.
Alvarado, J. A., Dhande, O. S., Prosseda, P. P., Kowal, T. J., Ning, K., Jabbehdari, S., Hu, Y., Sun, Y. (2020). Developmental Distribution of Primary Cilia in the Retinofugal Visual Pathway. Journal of Comparative Neurology, accepted for publication. 
C. A. Menéndez, F. Byléhn, G. R. Perez-Lemus, W. Alvarado, J. J. de Pablo, Molecular characterization of ebselen binding activity to SARS-CoV-2 main protease. Sci. Adv. 6, eabd0345 (2020).
Winkelman, JD*, Anderson, CA*, Suarez, C, Kovar, DR, Gardel, ML. Evolutionary diverse LIM domain-containing proteins bind stressed actin filaments through a conserved mechanism.  Proc Natl Acad Sci USA. 2020 Oct 13;117(41):25532-25542. doi: 10.1073/pnas.2004656117. Epub 2020 Sep 28.
Senevirathne G, Baumgart S, Shubin N, Hanken J, Shubin NH. Ontogeny of the anuran urostyle and the developmental context of evolutionary novelty. Proc Natl Acad Sci U S A. 2020 Feb 11;117(6):3034-3044. doi: 10.1073/pnas.1917506117. Epub 2020 Jan 27. PMID: 31988131; PMCID: PMC7022158.   
KR Beilsmith, M Perisin, J Bergelson  Natural bacterial assemblages in Arabidopsis thaliana tissues become more distinguishable and diverse during host development. bioRxiv  doi: https://doi.org/10.1101/2020.03.04.958165   
KR Beilsmith, M Perisin, J Bergelson  Transient interactions and influence among bacteria in field-grown Arabidopsis thaliana tissues  doi.org/10.1101/2020.03.05.974105 bioRxiv
Biddanda, Arjun; Rice, Daniel P; Novembre, John.  (2020) Geographic patterns of human allele frequency variation: a variant-centric perspective BioRxiv Cold Spring Harbor Laboratory
Blanc, J, Kemling, K, Buckler, E, Josephs, E. Local adaptation contributes to gene expression  divergence in maize. bioRxiv 231217 (2020) doi: https://doi.org/10.1101/2020.08.01.231217
Bojanek K, Zhu Y, MacLean J (2020) Cyclic transitions between higher order motifs underlie sustained asynchronous spiking in sparse recurrent networks. PLoS Comput Biol 16(9): e1007409. https://doi.org/10.1371/journal. pcbi.1007409
Fichtner  AS, Karunakaran MM, Gu S, Boughter CT, Borowska MT, Starick L, Nöhren A, Göbel TW, Adams EJ, Herrmann T. (2020)  Alpaca ( Vicugna pacos), the first nonprimate species with a phosphoantigen-reactive Vγ9Vδ2 T cell subset. PNAS. 117(12):6697-6707     
Fichtner  AS, Karunakaran MM, Gu S, Boughter CT, Borowska MT, Starick L, Nöhren A, Göbel TW, Adams EJ, Herrmann T. (2020)  Alpaca ( Vicugna pacos), the first nonprimate species with a phosphoantigen-reactive Vγ9Vδ2 T cell subset. PNAS. 117(12):6697-6707
Castro CD, Boughter CT, Broughton AE, Ramesh A. Diversity in recognition and function of human γδ T cells. Immunological Reviews. 01 Nov 2020, 298(1):134-152
DOI: 10.1111/imr.12930 PMID: 33136294
Castro CD, Boughter CT, Broughton AE, Ramesh A. Diversity in recognition and function of human γδ T cells. Immunological Reviews. 01 Nov 2020, 298(1):134-152
DOI: 10.1111/imr.12930 PMID: 33136294
Chen, Wenjun, Yabing Hu, Charles F. Lang, Jordan S. Brown, Sierra Schwabach, Xiaoyan Song, Ying Zhang et al. "The Dynamics of P Granule Liquid Droplets Are Regulated by the Caenorhabditis elegans Germline RNA Helicase GLH-1 via Its ATP Hydrolysis Cycle." Genetics 215, no. 2 (2020): 421-434.
Grasselli, G, Boele, HJ, Titley, HK, Bradford, N, van Beers, L, Jay, L, Gerco, C, Busch, SE, De Zeeuw, CI, Schonewille, M, Hansel, C. (2020) SK2 channels in cerebellar purkinje cells contribute to excitability modulation in motor-learning specific memory traces. PLoS Biology, 18(1). PMC6964916   
Calderazzo, SM, Busch, SE, Moore, TL, Rosene, DL, Medalla, M. (2020) Distribution and Overlap of entorhinal, premotor, and amygdalar connections in the monkey anterior cingulate cortex. Journal of Comparative Neurology, doi.org/10.1002/cne.24986
Jason B. Williams, Shuyin Li, Emily F. Higgs, Alexandra Cabanov, Xiaozhong Wang, Haochu Huang & Thomas F. Gajewski. Tumor heterogeneity and clonal cooperation influence the immune selection of IFN-γ-signaling mutant cancer cells. Nature Communications 11, 602 (2020).
Cao JZ, Liu H, Wickrema A, Godley LA. HIF-1 directly induces TET3 expression to enhance 5-hmC density and induce erythroid gene expression in hypoxia. Blood Advances. 2020 Jul 14;4(13):3053-3062. PMCID: PMC7362358   
Qiu Z, Lin AP, Jiang S, Elkashef SM, Myers J, Srikantan S, Sasi B, Cao JZ, Godley LA, Rakheja D, Lyu Y, Zheng S, Madesh M, Shiio Y, Dahia PLM, Aguiar RCT. MYC Regulation of D2HGDH and L2HGDH Influences the Epigenome and Epitranscriptome. Cell Chem Biol. 2020 May 21;27(5):538-550.e7.  
Cavanaugh, K., Chmiel, T., and Gardel, M. (2020) Caveolae Spelunking: Exploring a new modality in tensional homeostasis. Developmental Cell. https://doi.org/10.1016/j.devcel.2020.06.016 
Cavanaugh, K, Staddon, M, Banerjee, S, Gardel, M. (2020) Adaptive Viscoelasticity of Epithelial Cell Junctions: From Models to Methods. Current Opinions in Genetics and Development, 2020 63:86-94 https://doi.org/10.1016/j.gde.2020.05.018
Cavanaugh, K, Oakes, P, Gardel, M. (2020) Optogenetic control of RhoA to probe sub-cellular mechanochemical circuitry. Current Protocols in Cell Biology, 86, e102. doi: 10.1002/cpcb.102  
Cavanaugh, K, Staddon, M, Munro, E, Banerjee, S, Gardel, M. (2020) RhoA mediates epithelial cell shape changes via mechanosensitive endocytosis. Developmental Cell 52 1-15. https://doi.org/10.1016/j.devcel.2019.12.002  
Staddon, M, Cavanaugh, K, Munro, E, Gardel, M, Banerjee, S. (2019) Mechanosensitive junction remodeling promotes robust epithelial morphogenesis. Biophys J. doi: 10.1016/j.bpj.2019.09.027. 
Santos A, Shauchuk Y, Cichoń U, Vavra KC, Rock RS. How actin tracks affect myosin motors. Adv Exp Med Biol. 1239:183-197 (2020)   
Bryan DS, Stack M, Krysztofiak K, Cichoń U, Thomas DG, Surcel A, Schiffhauer ES, Beckett MA, Khodarev NN, Xue L, Poli EC, Pearson AT, Posner MC, Robinson DN, Rock RS*, Weichselbaum RR*. 4-Hydroxyacetophenone modulates the actomyosin cytoskeleton to reduce metastasis. Proc Natl Acad Sci U S A. 117(36):22423-22429 (2020).
João M. G. Capurucho, Mary V. Ashley, Brian R. Tsuru, Jacob C. Cooper & John M. Bates. 2020. Dispersal ability correlates with range size in Amazonian habitat-restricted birds. Proc. of the Roy. Soc. B: Biological Sciences https://doi.org/10.1098/rspb.2020.1450
Owens, HL, V Ribiero, EE Saupe, ME Cobos, PA Hosner, JC Cooper, AM Samy, V Barve, N Barve, CJ Muñoz‐R, AT Peterson. 2020. Acknowledging uncertainty in evolutionary reconstructions of ecological niches. Ecology and Evolution DOI: 10.1002/ece3.6359. 
Hruska, JP, JC Cooper, MB Robbins. 2020. First record of Mexican Whip-poor-will Antrostomus arizonae in Nicaragua. Cotinga 42:56-57.   
Voight, JR, JC Cooper, RW Lee. 2020. Stable isotopic evidence of mixotrophy in xylophagaids, deep-sea wood-boring bivalves. Frontiers in Marine Science, doi:10.3389/fmars.2020.00050
Li, Y., Osuma, A., Correa, E., Okebalama, M., Dao, P., Gaylord, O., ... & Kratsios, P. (2020). Establishment and maintenance of motor neuron identity via temporal modularity in terminal selector function. bioRxiv.

Pillai, Arvind S., Chandler, Shane A., ... Cortez-Romero, Carlos R., ... Thornton, Joseph W. (2020). Origin of complexity in haemoglobin evolution. Nature.  581:480-485. PMID: 32461643

De Leon A, Hanlon EC. "Chapter 23: Impact of Sleep Restriction on Food Intake and Food Choice." Neurological Modulation of Sleep: Mechanisms and Function of Sleep Health (1st Edition). Eds. Ronald R. Watson & Victor Preedy. Elsevier, January 2020.
Ding J., and Wei, W. Dampening light sensitivity. Science 368, 471-472 (2020).    
Alan Selewa, Ryan Dohn, Heather Eckhart, Stephanie Lozano, Bingqing Xie, Eric Gauchat, Reem Elorbany, Katherine Rhodes, Jonathan Burnett, Yoav Gilad, Sebastian Pott, Anindita Basu.  (2020)  Systematic Comparison of High Throughput Single-Cell and Single-Nucleus Transcriptomes during Cardiomyocyte Differentiation. Scientific Reports.
Can Dong, Mark E. J. Sheffield. Distinct place cell dynamics in CA1 and CA3 encode experience in new contexts. doi: https://doi.org/10.1101/2020.09.10.292177
Saborni Chakraborty, Joseph Gonzalez, Karlie Edwards, Vamsee Mallajosyula, Anthony S. Buzzanco, Robert Sherwood, Cindy Buffone, Nimish Kathale, Susan Providenza, Markus M. Xie, Jason R. Andrews, Catherine A. Blish, Upinder Singh, Haley Dugan, Patrick C. Wilson, Tho D. Pham, Scott D. Boyd, Kari C. Nadeau, Benjamin A. Pinsky, Sheng Zhang, Matthew J. Memoli, Jeffery K. Taubenberger, Tasha Morales, Jeffrey M. Schapiro, Gene S. Tan, Prasanna Jagannathan, Taia T. Wang Proinflammatory IgG Fc structures in patients with severe COVID-19  Version 2. medRxiv. Preprint. 2020 May 18 [revised 2020 Nov 10]. doi: 10.1101/2020.05.15.20103341  PMCID: PMC7252581
Christopher T. Stamper, Haley L. Dugan, Lei Li, Nicholas W. Asby, Peter J. Halfmann, Jenna J. Guthmiller, Nai-Ying Zheng, Min Huang, Olivia Stovicek, Jiaolong Wang, Maria Lucia Madariaga, Kumaran Shanmugarajah, Maud O. Jansen, Fatima Amanat, Isabelle Stewart, Siriruk Changrob, Henry A. Utset, Jun Huang, Christopher A. Nelson, Ya-Nan Dai, Paige D. Hall, Robert P. Jedrzejczak, Andrzej Joachimiak, Florian Krammer, Daved H. Fremont, Yoshihiro Kawaoka, Patrick C. Wilson  Distinct B cell subsets give rise to antigen-specific antibody responses against SARS-CoV-2  Version 1. Res Sq. Preprint. 2020 Sep 25. doi: 10.21203/rs.3.rs-80476/v1  PMCID: PMC7523131
Jenna J. Guthmiller, Olivia Stovicek, Jiaolong Wang, Siriruk Changrob, Lei Li, Peter Halfmann, Nai-Ying Zheng, Henry Utset, Christopher T. Stamper, Haley L. Dugan, William D. Miller, Min Huang, Ya-Nan Dai, Christopher A. Nelson, Paige D. Hall, Maud Jansen, Kumaran Shanmugarajah, Jessica S. Donington, Florian Krammer, Daved H. Fremont, Andrzej Joachimiak, Yoshihiro Kawaoka, Vera Tesic, Maria Lucia Madariaga, Patrick C. Wilson  SARS-CoV-2 infection severity is linked to superior humoral immunity against the spike  Version 1. bioRxiv. Preprint. 2020 Sep 13. doi: 10.1101/2020.09.12.294066  PMCID: PMC7491512
Guthmiller, JJ . . . Dugan, H, et al. (2020) Polyreactive Broadly Neutralizing B Cells are Selected to Provide Defense Against Pandemic Threat Influenza Viruses. Immunity. 2020 Dec 15;53(6):1230-1244.e5.  doi: 10.1016/j.immuni.2020.10.005. Epub 2020 Oct 22.
Dugan, HL, Guthmiller, JJ, et al. (2020) Pre-existing immunity shapes distinct antibody landscapes following influenza virus infection and vaccination. Science Translational Medicine  09 Dec 2020: Vol. 12, Issue 573, eabd3601 DOI: 10.1126/scitranslmed.abd3601
Gallagher G*, Duncombe R*, Steeves T*. Establishing Climate Change Resilience in the Great Lakes in Response to Flooding. Journal of Science Policy and Governance. Journal of Science Policy & Governance Volume 17, Issue 01 September 30, 2020.
Alan Selewa, Ryan Dohn, Heather Eckhart, Stephanie Lozano, Bingqing Xie, Eric Gauchat, Reem Elorbany, Katherine Rhodes, Jonathan Burnett, Yoav Gilad, Sebastian Pott, Anindita Basu.  (2020)  Systematic Comparison of High Throughput Single-Cell and Single-Nucleus Transcriptomes during Cardiomyocyte Differentiation. Scientific Reports.
Blake, L. E., Roux, J., Hernando-Herraez, I., Banovich, N. E., Perez, R. G., Hsiao, C. J., Eres, I., Cuevas, C., Marques-Bonet, T., & Gilad, Y. (2020). A comparison of gene expression and DNA methylation patterns across tissues and species. Genome research, 30(2), 250-262. https://doi.org/10.1101/gr.254904.119. PMCID: PMC7050529   
Serrano-Saiz, E., Gulez, B., Pereira, L., Gendrel, M., Kerk, S. Y., Vidal, B., Feng, W ... & Hobert, O. (2020). Modular Organization of cis-Regulatory Control Information of Neurotransmitter Pathway Genes in Caenorhabditis elegans. Genetics, 215(3), 665-681.   
Feng, W., Li, Y., Dao, P., Aburas, J., Islam, P., Elbaz, B., ... & Kratsios, P. (2020). A terminal selector prevents a Hox transcriptional switch to safeguard motor neuron identity throughout life. Elife, 9, e50065.   
Frazier, K., Kambal, A., Zale, E.A., Pierre, J.F., Hubert, N., Miyoshi, S., Miyoshi, J., Ringus, D., Harris, D., Yang, K., et al. (2020). High fat diet disrupts diurnal interactions between REG3γ and small intestinal gut microbes resulting in metabolic dysfunction. BioRxiv 2020.06.17.130393.   
Wu, J., Frazier, K., Zhang, J., Gan, Z., Wang, T., and Zhong, X. (2020). Emerging role of m6 A RNA methylation in nutritional physiology and metabolism. Obes Rev 21, e12942.
Gartner, Samantha M., and Rita S. Mehta. "Effects of Diet and Intraspecific Scaling on the Viscera of Muraenid Fishes." Zoology 139 (2020): 125752.
Alan Selewa, Ryan Dohn, Heather Eckhart, Stephanie Lozano, Bingqing Xie, Eric Gauchat, Reem Elorbany, Katherine Rhodes, Jonathan Burnett, Yoav Gilad, Sebastian Pott, Anindita Basu.  (2020)  Systematic Comparison of High Throughput Single-Cell and Single-Nucleus Transcriptomes during Cardiomyocyte Differentiation. Scientific Reports.
Gertsenshteyn, I., Giurcanu, M., Vaupel, P. and Halpern, H. (2020), Biological validation of electron paramagnetic resonance (EPR) image oxygen thresholds in tissue. J Physiol. doi:10.1113/JP278816   
Redler G, Pearson E, Liu X, Gertsenshteyn I, Epel B, Pelizzari C, Aydogan B, Weichselbaum R, Halpern HJ, Wiersma RD. Small animal IMRT using 3D printed compensators. Int J Radiat Oncol Biol Phys. 2020 Dec 26:S0360-3016(20)34693-9. doi: 10.1016/j.ijrobp.2020.12.028. Epub ahead of print. PMID: 33373659.
Yang F, Carmona A, Goddi A, Bhushan A, Cohen RN, Brey EM. (2020). A 3D human adipose tissue model within a microfluidic device. Lab Chip. 2020 Dec 22.  doi: 10.1039/d0lc00981d. Kahn JH, Goddi A, Sharma A, et al. SMRT Regulates Metabolic Homeostasis and Adipose Tissue Macrophage Phenotypes in Tandem, [2020 Aug 8]. Endocrinology. 2020;bqaa132. doi:10.1210/endocr/bqaa132   
Jonathan H Kahn, Anna Goddi, Aishwarya Sharma, Joshua Heiman, Alanis Carmona, Yan Li, Alexandria Hoffman, Kelly Schoenfelt, Honggang Ye, Alexandria M Bobe, Lev Becker, Anthony N Hollenberg, Ronald N Cohen, SMRT Regulates Metabolic Homeostasis and Adipose Tissue Macrophage Phenotypes in Tandem, Endocrinology, Volume 161, Issue 10, October 2020, bqaa132, https://doi.org/10.1210/endocr/bqaa132
Collins PL, Purman C, Porter SI, Nganga V, Saini A, Hayer KE, Gurewitz GL, Sleckman BP, Bednarski JJ, Bassing CH, Oltz EM. DNA double-strand breaks induce H2Ax phosphorylation domains in a contact-dependent manner. Nat Commun. 2020 Jun 22;11(1):3158. doi: 10.1038/s41467-020-16926-x. PMID: 32572033; PMCID: PMC7308414.   
Sun X, Wang Z, Hall JM, et al. Chromatin-enriched RNAs mark active and repressive cis-regulation: An analysis of nuclear RNA-seq. PLoS Comput Biol. 2020;16(2):e1007119. Published 2020 Feb 10. doi:10.1371/journal.pcbi.1007119
Wu, D.*, Harrison, D.L.*, Mutlu, G.M., Huang, J., Fang, Y. (2020). Single-cell metabolic imaging reveals RhoA triggers a glycolytic burst in motile endothelial cells. Nature Metabolism [in revisions] 
G.A. Wildenberg, A.M. Sorokina, J.L. Koranda, A. Monical, C. Heer, M.E. Sheffield, X. Zhuang, DS McGehee, N. Kasthuri. Cocaine causes rapid remodeling of dopaminergic axons, synapses, and mitochondria. bioRxiv 2020.09.29.318881; doi: https://doi.org/10.1101/2020.09.29.318881
Viktor Bollen, Samuel A. Hendley, Jonathan D. Paul, Adam D. Maxwell, Kevin J. Haworth, Christy K. Holland, Kenneth B. Bader, "In vitro thrombolytic efficacy of single- and five-cycle histotripsy pulses and rt-PA," Ultrasound in Medicine and Biology. 2020 Feb; 46(2): 336-34 
Herrera-Álvarez, S., Karlsson, E., Ryder, O. A., Lindblad-Toh, K., & Crawford, A. J. (2020). How to make a rodent giant: Genomic basis and tradeoffs of gigantism in the capybara, the world's largest rodent.  Molecular Biology and Evolution, msaa285, https://doi.org/10.1093/molbev/msaa285
Mohammadi, S., Yang, L., Harpak, A., Herrera-Álvarez, S., del Pilar Rodríguez-Ordoñez, M., Peng, J., ... & Andolfatto, P. (2020). Concerted evolution reveals co-adapted amino acid substitutions in frogs that prey on toxic toads. bioRxiv.

Jonathan H Kahn, Anna Goddi, Aishwarya Sharma, Joshua Heiman, Alanis Carmona, Yan Li, Alexandria Hoffman, Kelly Schoenfelt, Honggang Ye, Alexandria M Bobe, Lev Becker, Anthony N Hollenberg, Ronald N Cohen, SMRT Regulates Metabolic Homeostasis and Adipose Tissue Macrophage Phenotypes in Tandem, Endocrinology, Volume 161, Issue 10, October 2020, bqaa132, https://doi.org/10.1210/endocr/bqaa132

Hu Q, Whitney HM, Giger ML. "A deep learning methodology for improved breast cancer diagnosis using multiparametric MRI." Scientific Reports 10.1 (2020): 1-11.    Hu Q, Whitney HM, Giger ML. "Radiomics methodology for breast cancer diagnosis using multiparametric magnetic resonance imaging." Journal of Medical Imaging 7.4 (2020): 044502.   
Gong H, Hu Q, Walther A, Koo CW, Takahashi EA, Levin DL, Johnson TF, Hora MJ, Leng S, Fletcher JG, McCollough CH. "Deep-learning-based model observer for a lung nodule detection task in computed tomography." Journal of Medical Imaging 7.4 (2020): 042807. 
Ting S*, Martinez-Garcia E*, Huang S, Bertolli SK, Kelly KA, Cutler KJ, Su ED, Zhi H, Tang Q, Radey MC, Raffatellu M, Peterson SB, de Lorenzo V, Mougous JD (2020) Targeted depletion of bacteria from mixed populations by programmable adhesion with antagonistic competitor cells. Cell Host Microbe doi: 10.1016/j.chom.2020.05.006 (*authors contributed equally) PMID: 32470328
Xiaolin Huang, Hector Acaron Ledesma and Wei Wei. "Synapse formation in the developing vertebrate retina." In Synapse Development and Maturation: Comprehensive Developmental Neuroscience. Chapter 9 page 213-230. (Academic Press, Elsevier Inc. 2020)
Johnston WJ, Palmer SE, Freedman DJ (2020) Nonlinear mixed selectivity produces noisetolerant neural representations. PLOS Computational Biology, https://doi.org/10.1371/  journal.pcbi.1007544.
Jonathan H Kahn, Anna Goddi, Aishwarya Sharma, Joshua Heiman, Alanis Carmona, Yan Li, Alexandria Hoffman, Kelly Schoenfelt, Honggang Ye, Alexandria M Bobe, Lev Becker, Anthony N Hollenberg, Ronald N Cohen, SMRT Regulates Metabolic Homeostasis and Adipose Tissue Macrophage Phenotypes in Tandem, Endocrinology, Volume 161, Issue 10, October 2020, bqaa132, https://doi.org/10.1210/endocr/bqaa132

Kasal, D.N. and A. Bendelac. 2020. Multi-transcription factor reporter mice delineate early precursors to the LTi and ILC lineages. J Exp Med (2021) 218 (2): e20200487. https://doi.org/10.1084/jem.20200487

Alverdy JA, Keskey RC, Thewissen R.  Can the cecal ligation and puncture model be repurposed to better inform therapy in human sepsis? Infection and Immunity 88 (9). 2020  
Keskey RC, Cone J, DeFazio J, Alverdy J.  The use of fecal microbiota transplant in sepsis. Translational Research 7(7) 2020 
Madariaga ML, Guthmiller J, Schrantz S, Jansen M, Christensen C, Kumar M, Prochaska M, Wool G, Durkin-Celauro A, Oh W, Trockman L, Vigneswaran J, Keskey R, Shaw D, et al.  Clinical predictors of donor antibody titer and correlation with recipient antibody response in a COVID-19 convalescent plasma clinical trial. Journal of Internal Medicine (Accepted September 2020) 
Zaborin A, Bernabe BP, Keskey RC, Sangwan N, Hyoju S, Gilber JA, Zaborina O, Alverdy JC. Normal compartmentalization of the microbiota between the lumen and crypts is lost in the murine cecum following surgical injury. MSystems 5 (20). 2020 
Kim S,  Defazio J, Hyoju S, Sangani K, Keskey RC, Krezalek M, Khodarev N, Sangwan N, Christley S, Harris K, Malik A, Zaborin A, Bouziat R, Ranoa DR, Wigerinck M, Ernest J, Shakhseer B, Fleming I, Weichselbaum R, Antonopoulos D, Gilbert J, Barreiro, L, Zaborina O, Jabri B, Alverdy JA.  Fecal microbiota transplant rescues mice from sepsis due to multi-drug resistant healthcare pathogens by restoring systemic immunity. Nature Communications 11 (1): 1-11. 2020 
Peter A. Savage, David E.J. Klawon, Christine H. Miller (2020)  Regulatory T cell Development  Annu Rev Immunol   
Christine H. Miller, David E. J. Klawon, Sharon Zeng, Victoria Lee, Nicholas D. Socci, Peter A. Savage  (2020)  Eomes identifies thymic precursors of self-specific memory-phenotype CD8+ T cells  Nat Immunol   
Morrison J, Knoblauch N, Marcus JH, Stephens M, He X. Mendelian randomization accounting for correlated and uncorrelated pleiotropic effects using genome-wide summary statistics. Nat Genet. 2020 Jul;52(7):740-747. doi: 10.1038/s41588-020-0631-4. Epub 2020 May 25. Erratum in: Nat Genet. 2020 May 29;: PMID: 32451458; PMCID: PMC7343608.    
Li J, Xie Y, Cornelius S, Jiang X, Sando R, Kordon SP, Pan M, Leon K, Südhof TC, Zhao M, Araç D. (2020) Alternative splicing controls teneurin-latrophilin interaction and synapse specificity by a shape-shifting mechanism. Nat Commun. PMID: 32358586
Rocha, M., Beiriger, A., Kushkowski, E. E.,  Miyashita, T., Singh, N., Venkataraman, V., and  Prince V. E., (2020)  From head to tail: regionalization of the neural crest.  Development, 147 7, dev193888. doi:10.1242/dev.193888
Ladd N.A., Froyd C.A., Adams E.J. Production of MR1 tetramers loaded with microbial ligands. Methods in Molecular Biology on MAIT Cells. Eds. Magalhaes I, Kaipe H (Springer, London). 2020. PMCID 31792824.
Chen, Wenjun, Yabing Hu, Charles F. Lang, Jordan S. Brown, Sierra Schwabach, Xiaoyan Song, Ying Zhang et al. "The Dynamics of P Granule Liquid Droplets Are Regulated by the Caenorhabditis elegans Germline RNA Helicase GLH-1 via Its ATP Hydrolysis Cycle." Genetics 215, no. 2 (2020): 421-434.
van Ouwerkerk AF, Hall AW, Kadow ZA, Lazarevic S, Reyat JS, Tucker NR, Nadadur RD, Bosada FM, Bianchi V, Ellinor PT, Fabritz L, Martin JF, de Laat W, Kirchhof P, Moskowitz IP, Christoffels VM. Epigenetic and Transcriptional Networks Underlying Atrial Fibrillation. Circulation Research. 18 Jun 2020. 2020;127:34-50.  
Lee, J and Wang YL . Prognostic and Predictive Molecular Biomarkers in Chronic Lymphocytic Leukemia   J Mol Diagn. 2020 Sep;22(9):1114-1125. PMID:32615167 
Lee M, Chang EB. (2020)  Inflammatory Bowel Diseases and the Microbiome: Searching the Crime Scene for Clues. Gastroenterology. Gastroenterology. Nov 27;S0016-5085(20)35507-4.  doi: 10.1053/j.gastro.2020.09.056.
Lele, Abhimanyu, M. Arasumani, C. K. Vishnudas, Viral Joshi, Devcharan Jathanna, and V. V. Robin. "Elevation and landscape change drive the distribution of a montane, endemic grassland bird." Ecology and evolution 10, no. 14 (2020): 7755-7767.
Levy, M., Sporns, O., & MacLean, J. N. (2020). Network Analysis of Murine Cortical Dynamics Implicates Untuned Neurons in Visual Stimulus Coding. Cell reports, 31(2), 107483.   
Li, H., Januszewski, M., Jain, V., & Li, P. H. (2020). Neuronal Subcompartment Classification and Merge Error Correction. (On Bioarxiv, accepted to MICCAI proceedings 2020)
Feng, W., Li, Y., Dao, P., Aburas, J., Islam, P., Elbaz, B., ... & Kratsios, P. (2020). A terminal selector prevents a Hox transcriptional switch to safeguard motor neuron identity throughout life. Elife, 9, e50065.   
Balasubramanian, K., Papadourakis, V., Liang, W., Takahashi, K., Best, M. D., Suminski, A. J., & Hatsopoulos, N. G. (2020). Propagating Motor Cortical Dynamics Facilitate Movement Initiation. Neuron.
Kyle, Colin H., Jiawei Liu, Molly E. Gallagher, Vanja Dukic, and Greg Dwyer. "Stochasticity and Infectious Disease Dynamics: Density and Weather Effects on a Fungal Insect Pathogen." The American Naturalist 195, no. 3 (2020): 504-523.
A. Dimov, G. Christoforidis, N. Saadat, M. Liu, Y. Jeong, S. Roth, M. Niekrasz, T. Carroll. "QSM in canine model of acute cerebral ischemia: A pilot study". MRM, accepted for publication 2020.    
N. Saadat, G. Christoforidis, Y. Jeong, M. Liu, A. Dimov, S. Roth, M. Niekrasz, S. Ansari , T. Carroll. "Influence of simultaneous pressor and vasodilatory agents on the evolution of infarct growth in experimental acute middle cerebral artery occlusion." Journal of NeuroInterventional Surgery, 2020.   
M. Liu, Z. Pan, R. Basu Thakur, H. Goksu, S.Meyer, B.Benson. N.A. "Simulation and Calibration of a Compact Fourier Transform Spectrometer". OSA, Applied Optics, 2020.    
Baeten, JT, Liu, W, Preddy, I, and McNerney, ME. (2020) Identification of chromosome 7 myeloid tumor suppressor genes. Under review.
Wang Y., Lobb-Rabe M, Ashley J, Carrillo RA. Structural and functional synaptic plasticity induced by convergent synapse loss requires co-innervation in the Drosophila neuromuscular circuit. BioRxiv. doi: https://doi.org/10.1101/2020.06.12.147421
Ma, Q., Mermelstein, R. & Hedeker, D. A three-level mixed model to account for the correlation at both the between-day and the within-day level for ecological momentary assessments. Health Serv Outcomes Res Method 20, 247-264 (2020). https://doi.org/10.1007/s10742-020-00220-w
Ober, Carole, Chris G. McKennan, Kevin M. Magnaye, Matthew C. Altman, Charles Washington 3rd, Catherine Stanhope, Katherine A. Naughton et al. "Expression quantitative trait locus fine mapping of the 17q12-21 asthma locus in African American children: a genetic association and gene expression study." The Lancet Respiratory Medicine 8, no. 5 (2020): 482-492.
McIntire, E., Taapken, S., Leonhard, K., & Larson, A. L. (2020). Genomic stability testing of pluripotent stem cells. Current Protocols in Stem Cell Biology, 52, e107. doi: 10.1002/cpsc.107   

McLean, Kaitlin C., and Malay Mandal. "It Takes Three Receptors to Raise a B Cell." Trends in Immunology (2020).

Kennedy, Domenick E., Michael K. Okoreeh, Mark Maienschein-Cline, Junting Ai, Margaret Veselits, Kaitlin C. McLean, Yogesh Dhungana et al. "Novel specialized cell state and spatial compartments within the germinal center." Nature Immunology 21, no. 6 (2020): 660-670.

Licznerski P, Park HA, ... Mehta N, ... Jonas EA. (2020). ATP Synthase c-Subunit Leak Causes Aberrant Cellular Metabolism in Fragile X Syndrome. Cell. 82(5):1170-1185.e9. doi: 10.1016/j.cell.2020.07.008. PMID: 32795412; PMCID: PMC7484101.

Meng JL, Wang Y, Carrillo RA, Heckscher ES. 2020. Temporal transcription factors determine circuit membership by permanently altering motor neuron-to-muscle synaptic partnerships. eLife. doi: 10.7554/eLife.56898.
MercadoDíaz, J. A., Lücking, R., Moncada, B., Widhelm, T. J., & Lumbsch, H. T. (2020). Elucidating species richness in lichen fungi: The genus Sticta (Ascomycota: Peltigeraceae) in Puerto Rico. Taxon69(5), 851-891.

Simon, A., Lücking, R., Moncada, B., Mercado-Díaz, J. A., Bungartz, F., Cáceres, M. E. D. S., ... & Goffinet, B. (2020). Emmanuelia, a new genus of lobarioid lichen-forming fungi (Ascomycota: Peltigerales): phylogeny and synopsis of accepted species. Plant and Fungal Systematics65(1), 76-94.

Lindgren H, Moncada B, Lücking R, Magain N, Simon A, Goffinet B, Sérusiaux E, Nelsen MP, Mercado-Díaz JA, Widhelm TJ, Lumbsch HT. Cophylogenetic patterns in algal symbionts correlate with repeated symbiont switches during diversification and geographic expansion of lichen-forming fungi in the genus Sticta (Ascomycota, Peltigeraceae). Mol Phylogenet Evol. 2020 Sep;150:106860. doi: 10.1016/j.ympev.2020.106860. Epub 2020 May 28. PMID: 32473336.

Serván, C. A., Capitán, J. A., Miller, Z. R., & Allesina, S. (2020). Effects of phylogeny on coexistence in model communities. In submission, Journal of the Royal Society Interface (preprint available on bioRxiv).   
Maynard, D. S., Miller, Z. R., & Allesina, S. (2020). Predicting coexistence in experimental ecological communities. Nature Ecology & Evolution, 4(1), 91-100.
G.A. Wildenberg, A.M. Sorokina, J.L. Koranda, A. Monical, C. Heer, M.E. Sheffield, X. Zhuang, DS McGehee, N. Kasthuri. Cocaine causes rapid remodeling of dopaminergic axons, synapses, and mitochondria. bioRxiv 2020.09.29.318881; doi: https://doi.org/10.1101/2020.09.29.318881
Yan, Y., Goodman, J.M., Moore, D.D. et al. Unexpected complexity of everyday manual behaviors. Nat Commun 11, 3564 (2020). https://doi.org/10.1038/s41467-020-17404-0. PMC7367296
Mittleman, Briana E., Sebastian Pott, Shane Warland, Tony Zeng, Zepeng Mu, Mayher Kaur, Yoav Gilad, and Yang Li. "Alternative polyadenylation mediates genetic regulation of gene expression." ELife 9 (2020).   
Mu, Zepeng, Wei Wei, Benjamin Jung Fair, Jinlin Miao, Ping Zhu, and Yang Li. "Impact of cell-type and context-dependent regulatory variants on human immune traits." bioRxiv (2020).   
Chen, Mengjie, Qi Zhan, Zepeng Mu, Lili Wang, Zhaohui Zheng, Jinlin Miao, Ping Zhu, and Yang I. Li. "Alignment of single-cell RNA-seq samples without over-correction using kernel density matching." bioRxiv (2020).
Bi S, Vela MB, Nathan AG, Gunter KE, Cook SC, Lopez FY, Nocon RS, Chin MH. Teaching Intersectionality of Sexual Orientation, Gender Identity, and Race/Ethnicity in a Health Disparities Course. MedEdPORTAL. 2020 Jul 31; 16: 10970. PMCID: PMC7394350 
Corallo B, Proser M, Nocon RS.  Comparing Rates of Multiple Chronic Conditions at Primary Care and Mental Health Visits to Community Health Centers vs. Private Practice Providers. Journal of Ambulatory Care Management. 2020 April/June; 43(2): 136-147. PMCID: PMC7329234
Kelley AT, Nocon RS, O'Brien MJ.  Diabetes Management in Community Health Centers: a Review of Policies and Programs. Current Diabetes Reports. 2020 February; 20(2):8. PMID: 32030514
Kennedy, Domenick E., Michael K. Okoreeh, Mark Maienschein-Cline, Junting Ai, Margaret Veselits, Kaitlin C. McLean, Yogesh Dhungana et al. "Novel specialized cell state and spatial compartments within the germinal center." Nature Immunology 21, no. 6 (2020): 660-670.

Adam, K.C.S., Doss, M.K., Pabon, E., Vogel, E., de Wit, H. (2020). Δ9-Tetrahydrocannabinol (THC) impairs visual working memory performance: a randomized crossover trial. Neuropsychopharmacology. https://doi.org/10.1038/s41386-020-0690-3

Pak, J.S., DeLoughery, Z.J., Wang, J. et al. NELL2-Robo3 complex structure reveals mechanisms of receptor activation for axon guidance. Nat Commun 11, 1489 (2020). https://doi.org/10.1038/s41467-020-15211-1
Y Park*, JEJ Patton*, GKA Hochberg & JW Thornton (2020) Comment on "Ancient origins of allosteric activation in a Ser-Thr kinase." Science. 2020 Nov 20;370(6519):eabc8301. doi: 10.1126/science.abc8301.
JS Park, ZJ DeLoughery, J Wang, N Acharya, Y Park, A Jaworski & E Özkan (2020) NELL2-Robo3 complex structure reveals mechanisms of receptor activation for axon guidance. Nat. Comm. 11(1), 1-14.
Espinosa M, Tannenbaum A, Kilaru M, Stevens J, Siegler M, Howell M, Parker WF. Bundled Consent in US Intensive Care Units. American Journal of Critical Care Medicine, American Journal of Critical Care, May 2020 https://doi.org/10.4037/ajcc2020502.   
Parker WF, Chin MH. Epistemic Authority and Trust in Shared Decision Making About Organ Transplantation. AMA Journal of Ethics. May 2020.   
Parker WF, Kevin C, Anderson A, Siegler M, Huang ES, Churpek MM. Practice Changes at U.S. Transplant Centers After the New Adult Heart Allocation Policy. Journal of the American College of Cardiology. June 2020. DOI: 10.1016/j.jacc.2020.01.066   
Piscitello MD, Kapania EM, Miller WD, Rojas JC, Siegler M, Parker WF. Variation in Ventilator Allocation Guidelines by US State during the Coronavirus Disease 2019 Pandemic: A Systematic Review. JAMA Network Open, June 2020. doi:10.1001/jamanetworkopen.2020.12606   
Parker WF, Churpek MM, Anderson AS. Is it too early to investigate survival outcomes of the new US heart allocation system? Journal of Heart and Lung Transplantation, January 2020, https://doi.org/10.1016/j.healun.2020.01.1343   
Miller WD, Peek ME, Parker WF. Scarce resource allocation scores threaten to exacerbate racial disparities in healthcare. CHEST, May 2020, doi: 10.1016/j.chest.2020.05.526   
Pearson SD, Hall JB, Parker WF. Two for one with split- or co-ventilation at the peak of the COVID-19 tsunami: is there any role for communal care when the resources for personalised medicine are exhausted? Thorax, June 2020, doi: 10.1136/thoraxjnl-2020-214929 
Y Park*, JEJ Patton*, GKA Hochberg & JW Thornton (2020) Comment on "Ancient origins of allosteric activation in a Ser-Thr kinase." Science. 2020 Nov 20;370(6519):eabc8301. doi: 10.1126/science.abc8301.
Wildenberg G.A., Rosen M.R., Lundell J., Paukner D., Freedman D., Kasthuri N. Primate neuronal connections are sparse as compared to mouse. Preprint at https://www.biorxiv.org/content/10.1101/2020.09.24.311852v1 (2020).
Pillai, A.S., Chandler, S.A., Liu, Y. et al. Origin of complexity in haemoglobin evolution. Nature 581, 480-485 (2020). https://doi.org/10.1038/s41586-020-2292-y
Vijay R, Guthmiller JJ, Sturtz AJ, Surette FA, Rogers KJ, Sompallae RR, Li F, Pope RL, Chan JA, de Labastida Rivera F, Andrew D, Webb L, Maury WJ, Xue HH, Engwerda CR, McCarthy JS, Boyle MJ, Butler NS. Infection-induced plasmablasts are a nutrient sink that impairs humoral immunity to malaria. Nat Immunol. 2020 Jul;21(7):790-801. doi: 10.1038/s41590-020-0678-5. Epub 2020 May 18. PMID: 32424361; PMCID: PMC7316608.
Sayaka Miura, Koichiro Tamura, Sergei L. Kosakovsky Pond, Louise A. Huuki, Jessica Priest, Jiamin Deng, Sudhir Kumar  A new method for inferring timetrees from temporally sampled molecular sequences  bioRxiv 620187; doi: https://doi.org/10.1101/620187
Randolph HE, Barreiro LB. Herd Immunity: Understanding COVID-19. Immunity. 2020. doi: 10.1016/j.immuni.2020.04.012.   
Colen, Jonathan*, Ming Han*, Rui Zhang, Steven A. Redford, Linnea M. Lemma, Link Morgan, Paul V. Ruijgrok et al. "Machine learning active-nematic hydrodynamics." arXiv preprint arXiv:2006.13203 (2020).
S. Park, K Prevost, EM Heideman, M-C Carrier, MA Reyer, W Liu, E Masse*, J Fei*, (2020) Dynamic interactions between the RNA chaperone Hfq, small regulatory RNAs and mRNAs in live bacterial cells, bioRxiv 
Alan Selewa, Ryan Dohn, Heather Eckhart, Stephanie Lozano, Bingqing Xie, Eric Gauchat, Reem Elorbany, Katherine Rhodes, Jonathan Burnett, Yoav Gilad, Sebastian Pott, Anindita Basu.  (2020)  Systematic Comparison of High Throughput Single-Cell and Single-Nucleus Transcriptomes during Cardiomyocyte Differentiation. Scientific Reports.
Malina, G., Heiferman, D., Riedy, L., Szujewski, C., Rezaii, E., Leonetti, J., Anderson, D. Pediatric vestibular schwannomas: case series and a systematic review with meta-analysis. Journal of Neurosurgery Pediatrics, 2020:1-9.
Rocha, M., Singh, N., Ahsan, K., Beiriger, A., & Prince, V. E. (2020). Neural crest development: insights from the zebrafish. Developmental Dynamics, 249(1), 88-111. PMCID= PMC7273345.   
Rocha, M., Beiriger, A., Kushkowski, E. E.,  Miyashita, T., Singh, N., Venkataraman, V., and  Prince V. E., (2020)  From head to tail: regionalization of the neural crest.  Development, 147 7, dev193888. doi:10.1242/dev.193888
Masse NY, Rosen MC, Freedman DJ. Reevaluating the Role of Persistent Neural Activity in Short-Term Memory. Trends Cogn Sci. 2020 Mar;24(3):242-258. doi: 10.1016/j.tics.2019.12.014. Epub 2020 Jan 29. PMID: 32007384; PMCID: PMC7288241.   
Zhou, Y, Rosen MC, Swaminathan SK, Masse NY, Zhu O, Freedman DJ. "Distributed functions of prefrontal and parietal cortices during sequential categorical decisions." BioRxiv (2020).   
Rosen MC, Tilley MJ, Freedman DJ. "Hierarchical biologically-inspired RNNs for distributed cognitive computations". Under review. NeurIPS (2020).
Rosenberg, J., Cao, G., Borja-Prieto, F., Huang, J. "Lattice Light-Sheet Microscopy Multi-Dimensional Analyses (LaMDA) of T-cell Receptor Dynamics Predict T-Cell Signaling States." Cell Systems, 2020. DOI: 10.1016/j.cels.2020.04.006. 
Rosenberg, Jillian, and Jun Huang. "Visualizing Surface T-Cell Receptor Dynamics Four-Dimensionally Using Lattice Light-Sheet Microscopy." JoVE (Journal of Visualized Experiments), 2020. DOI: 10.3791/59914 
V Sachdeva, K Husain, J Sheng, S Wang, A Murugan   Tuning environmental timescales to evolve and maintain generalists Proceedings of the National Academy of Sciences 117 (23), 12693-12699 3 2020   
Chen, Wenjun, Yabing Hu, Charles F. Lang, Jordan S. Brown, Sierra Schwabach, Xiaoyan Song, Ying Zhang et al. "The Dynamics of P Granule Liquid Droplets Are Regulated by the Caenorhabditis elegans Germline RNA Helicase GLH-1 via Its ATP Hydrolysis Cycle." Genetics 215, no. 2 (2020): 421-434.
Raudenbush, Stephen and Schwartz, Daniel (2020) Randomized Experiments in Education, with Implications for Multilevel Causal Inference. Annual Review of Statistics and Its Application, Vol. 7, Issue 1, pp. 177-208.  http://dx.doi.org/10.1146/annurev-statistics-031219-041205
Beauchamp, K., Beyett, T., Scott, M. W., & Zanatta, D. T. Accepted. Detection of  hybrid Pyganodon grandis and P. lacustris (Bivalvia: Unionidae) using F- and M-lineage mtDNA sequences and geometric morphometrics. Journal of Molluscan Studies.   
Scott, M. W., Morris, T.J. & Zanatta, D. T. Population structure, genetic diversity, and colonization history of the eastern pondmussel, Sagittunio nasutus, in the Great Lakes drainage. Aquatic Conservation: Marine and Freshwater Ecosystems, 30, 631-646.
Alan Selewa, Ryan Dohn, Heather Eckhart, Stephanie Lozano, Bingqing Xie, Eric Gauchat, Reem Elorbany, Katherine Rhodes, Jonathan Burnett, Yoav Gilad, Sebastian Pott, Anindita Basu.  (2020)  Systematic Comparison of High Throughput Single-Cell and Single-Nucleus Transcriptomes during Cardiomyocyte Differentiation. Scientific Reports.
Senevirathne G, Baumgart S, Shubin N, Hanken J, Shubin NH. Ontogeny of the anuran urostyle and the developmental context of evolutionary novelty. Proc Natl Acad Sci U S A. 2020 Feb 11;117(6):3034-3044. doi: 10.1073/pnas.1917506117. Epub 2020 Jan 27. PMID: 31988131; PMCID: PMC7022158.   
Natalya Shelchkova, Martina Poletti (2020) Modulations of foveal vision associated with microsaccade preparation. Proceedings of the National Academy of Sciences May 2020, 117 (20) 11178-11183; DOI: 10.1073/pnas.1919832117 

Foy, J, Shenouda, M, Ramahi, S, Armato, S, Ginat, D (2020) "Effect of an iterative reconstruction quantum noise reduction technique on computed tomography radiomic features," J. Med. Imag. 7(6), 064007, doi: 10.1117/1.JMI.7.6.064007.

Alzate-Correa D, . . . Szujewski CC, Silbaugh A, . . Otero, J. Neonatal Apneic Phenotype in a Murine Congenital Central Hypoventilation Syndrome Model is Induced Through Non-Cell Autonomous Developmental Mechanisms. Brain Pathology. July 2020.
Song, S.J, J. Sanders, F. Delsuc, J. Metcalf, K. Amato, M. Taylor, F. Mazel, H.L. Lutz, K. Winker, G. Graves, G. Humphrey, J. Gilbert, S.J. Hackett, K.P. White, H.R. Skeen, S.M. Kurtis, J. Withrow, T. Braile, M. Miller, K. McCracken, J. Maley, V. Ezenwa, A. Williams, J. Blanton, V. McKenzie, and R. Knight.  "Comparative analyses of vertebrate gut microbiomes reveal convergence between birds and bats." mBio (2020) 
Slezak, T, Bailey, LJ, Jaskolowski, M, et al. An engineered ultra‐high affinity Fab‐Protein G pair enables a modular antibody platform with multifunctional capability. Protein Science. 2020; 29: 141- 156. https://doi.org/10.1002/pro.3751  PMCID: PMC6933859
Linsin A. Smith*, Carlos Perez-Cervantes*, Rangarajan D. Nadadur, Andrew E. O. Hughes, Sui Wang, Joseph C. Corbo, Connie Cepko, Nicolas Lonfat#, Ivan P. Moskowitz#, "Enhancer transcription identifies cis-regulatory elements for photoreceptor cell types". Development 147, dev.184432 (2020).
G.A. Wildenberg, A.M. Sorokina, J.L. Koranda, A. Monical, C. Heer, M.E. Sheffield, X. Zhuang, DS McGehee, N. Kasthuri. Cocaine causes rapid remodeling of dopaminergic axons, synapses, and mitochondria. bioRxiv 2020.09.29.318881; doi: https://doi.org/10.1101/2020.09.29.318881
Wilson, Stamper, Dugan, and Li et al. "Distinct B cell subsets give rise to antigen-specific antibody responses against SARS-CoV-2" Res Sq. 2020 Sep 25;rs.3.rs-80476. doi: 10.21203/rs.3.rs-80476/v1. PMCID: PMC7523131
Bernstein …Stamper, …et al. "Immunogenicity of chimeric haemagglutinin-based, universal influenza virus vaccine candidates: interim results of a randomised, placebo-controlled, phase 1 clinical trial."   Lancet Infect Dis. 2020 Jan;20(1):80-91. PMID: 31630990   
Guthmiller, Stovicek, ... Stamper, et al. "SARS-CoV-2 infection severity is linked to superior humoral immunity against the spike"  bioRxiv. 2020 Sep 13;2020.09.12.294066 PMID: 32935099   
Haley L. Dugan, Jenna J. Guthmiller, Philip Arevalo, Min Huang, Yao-Qing Chen, Karlynn E. Neu, Carole Henry, Nai-Ying Zheng, Linda Yu-Ling Lan, Micah E. Tepora, Olivia Stovicek, Dalia Bitar, Anna-Karin E. Palm, Christopher T. Stamper, Siriruk Changrob, Henry A. Utset, Lynda Coughlan, Florian Krammer, Sarah Cobey, Patrick C. Wilson  Preexisting immunity shapes distinct antibody landscapes after influenza virus infection and vaccination in humans.  Science Translational Medicine  09 Dec 2020: Vol. 12, Issue 573, eabd3601 DOI: 10.1126/scitranslmed.abd3601
Stewart, E., X. Wang, G. l. Chupp, and R. R. Montgomery. 2020. Profiling cellular heterogeneity in asthma with single cell multiparameter CyTOF. J. leuk. Biol.     Gomez JL, Chen A, Diaz MP, Zirn N, Gupta A, Britto C, Sauler M, Yan X, Stewart E, Santerian K, Grant N, Liu Q, Fry R, Rager J, Cohn L, Alexis N, Chupp GL. A Network of Sputum MicroRNAs Is Associated with Neutrophilic Airway Inflammation in Asthma. Am J Respir Crit Care Med. 2020 Jul 1;202(1):51-64. doi: 10.1164/rccm.201912-2360OC. PMID: 32255668; PMCID: PMC7328332.
Garcia AJ 3rd, Szujewski CC. Finding Inspiration in opioid-induced respiratory depression. Journal of Physiology. January 2020.    
Alzate-Correa D, . . . Szujewski CC, Silbaugh A, . . Otero, J. Neonatal Apneic Phenotype in a Murine Congenital Central Hypoventilation Syndrome Model is Induced Through Non-Cell Autonomous Developmental Mechanisms. Brain Pathology. July 2020.
Fejerman L, Serrano-Gómez SJ, Tamayo LI. Breast Cancer Risk and Mortality in Women of Latin American Origin. In Advancing the Science of Cancer in Latinos 2020 (pp. 45-55). Springer, Cham.   
Tamayo LI, Lin H, Ahmed A, Shahriar H, Hasan R, Sarwar G, Eunus HM, Ahsan H, Pierce BL. Research Participants' Attitudes towards Receiving Information on Genetic Susceptibility to Arsenic Toxicity in Rural Bangladesh. Public Health Genomics (2020)    

Marker KM, Zavala VA, Vidaurre T, Lott PC, Vásquez JN, Casavilca-Zambrano S, Calderon M, Abugattas JE, Gomez HL, Fuentes HA, Picoaga RL, Cotrina JM, Neciosup SP, Castaneda CA, Morante Z, Valencia F, Torres J, Echeverry M, Bohorquez ME, Polanco-Echeverry G, Estrada-Florez AP, Serrano-Gomez SJ, Carmona-Valencia JA, Alvarado-Cabrero I, Sanabria Salas M, Velez A, Donado J, Song S, Cherry D, Tamayo LI, Huntsman S, Hu D, Ruiz-Cordero R, Balassanian R, Ziv E, Zabaleta J, Carvajal-Carmona L, COLUMBUS Consortium, Fejerman L. Human Epidermal Growth Factor Receptor 2-Positive Breast Cancer Is Associated with Indigenous American Ancestry in Latin American Women. Cancer Research (2020).           

Ishihara A, Ishihara J, Watkins EA, Tremain AC, Nguyen M, Solanki A, Katsumata K, Mansurov A, Budina E, Alpar AT, Peyman H, Maillat L, Reda JW, Kageyama T, Swartz MA, Yuba E, Hubbel JA. "Prolonged residence of albumin-fused IL-4 in the secondary lymphoid organs via FcRn ameliorates experimental autoimmune encephalomyelitis." NatBioEng. 2020 

Valbuena FM, Fitzgerald I, Strack RL, Andruska N, Smith L, & Glick BS. (2020). A photostable monomeric superfolder green fluorescent protein. Traffic21(8), 534–544. https://doi.org/10.1111/tra.12737.

Casler JC, Zajac AL, Valbuena FM, Sparvoli D, Jeyifous O, Turkewitz AP, Horne-Badovinac S, Green WN, & Glick BS. (2020). ESCargo: A regulatable fluorescent secretory cargo for diverse model organisms. Molecular Biology of the Cell, mbc.E20-09-0591. https://doi.org/10.1091/mbc.E20-09-0591

Rocha, M., Beiriger, A., Kushkowski, E. E.,  Miyashita, T., Singh, N., Venkataraman, V., and  Prince V. E., (2020)  From head to tail: regionalization of the neural crest.  Development, 147 7, dev193888. doi:10.1242/dev.193888
Abadie V, Kim SM, Lejeune T, Palanski BA, Ernest JD, Tastet O, Voisine J, Discepolo V, Marietta EV, Hawash MBF, Ciszewski C, Bouziat R, Panigrahi K, Horwath I, Zurenski MA, Lawrence I, Dumaine A, Yotova V, Grenier JC, Murray JA, Khosla C, Barreiro LB, Jabri B. IL-15, gluten and HLA-DQ8 drive tissue destruction in coeliac disease. Nature. 2020 Feb;578(7796):600-604. doi: 10.1038/s41586-020-2003-8. Epub 2020 Feb 12. PMID: 32051586; PMCID: PMC7047598.  
Chen, Mengjie, Qi Zhan, Zepeng Mu, Lili Wang, Zhaohui Zheng, Jinlin Miao, Ping Zhu, and Yang I. Li. "Alignment of single-cell RNA-seq samples without over-correction using kernel density matching." bioRxiv (2020).
Meng JL, Wang Y, Carrillo RA, Heckscher ES. 2020. Temporal transcription factors determine circuit membership by permanently altering motor neuron-to-muscle synaptic partnerships. eLife. doi: 10.7554/eLife.56898.
Wang Y., Lobb-Rabe M, Ashley J, Carrillo RA. Structural and functional synaptic plasticity induced by convergent synapse loss requires co-innervation in the Drosophila neuromuscular circuit. BioRxiv. doi: https://doi.org/10.1101/2020.06.12.147421
Ober, Carole, Chris G. McKennan, Kevin M. Magnaye, Matthew C. Altman, Charles Washington 3rd, Catherine Stanhope, Katherine A. Naughton et al. "Expression quantitative trait locus fine mapping of the 17q12-21 asthma locus in African American children: a genetic association and gene expression study." The Lancet Respiratory Medicine 8, no. 5 (2020): 482-492.
Titley, H. K.*, Watkins, G. V.*, Lin, C., Weiss, C., Mccarthy, M., Disterhoft, J. F., & Hansel, C. (2020). Intrinsic Excitability Increase in Cerebellar Purkinje Cells after Delay Eye-Blink Conditioning in Mice. The Journal of Neuroscience, 40(10), 2038-2046 (*co-first authors)
Weigel, B.L. and Pfister, C.A. 2020. The dynamics and stoichiometry of dissolved organic carbon release by kelp. Ecology. 2020 Oct 13;e03221. doi:10.1002/ecy.3221.  PMID: 33048348
Weigel, B.L.
, Welter, J.R., and P.C. Furey. 2020. Invertebrate grazing and epilithon assemblages control benthic nitrogen fixation in an N-limited river network. Freshwater Science 39 (3) doi: 10.1086/710023.
Weigel, B.L. 2020. Sea cucumber intestinal regeneration reveals deterministic assembly of the gut microbiome. Applied and Environmental Microbiology​ 86 (14): e00489-20. doi: 10.1128/AEM.00489-20.   
Stein P, Savy V, Williams AM, Williams CJ. Modulators of calcium signalling at fertilization. Open Biol. 2020 Jul;10(7):200118. doi: 10.1098/rsob.200118. Epub 2020 Jul 15. PMID: 32673518.
Xu H, Dzhashiashvili Y, Shah A, Kunjamma RB., Weng YL, Elbaz B, Fei QL, Jones JS, Li Y, Zhuang XX, Ming GL, He C, Popko B. m6A mRNA methylation is essential for oligodendrocyte maturation and CNS myelination. Neuron, 2020 Jan 22;105(2):293-309. PMID: 31901304.  
Yan, Y., Goodman, J.M., Moore, D.D. et al. Unexpected complexity of everyday manual behaviors. Nat Commun 11, 3564 (2020). https://doi.org/10.1038/s41467-020-17404-0
Bujnowska, M., Zhang, J., Dai, Q., Heideman, E. M., & Fei, J. (2020). Deoxyribozyme-based method for absolute quantification of N6-methyladenosine fractions at specific sites of RNA. Journal of Biological Chemistry, 295(20), 6992-7000.
Wytock, T,. Zhang, M., Jinich, A., Fiebig, A., Crosson, S., Motter, A. (2020). Extreme antagonism arising from gene environment interactions. Biophys J. 2020 Nov 17;119(10):2074-2086.  doi: 10.1016/j.bpj.2020.09.038. Epub 2020 Oct 15
McGilvray PT, Anghel SA, Sundaram A, Zhong F, Trnka MJ, Fuller JR, Hu H, Burlingame AL, Keenan RJ. (2020)    An ER translocon for multi-pass membrane protein biogenesis    Elife, Aug 21;9:e56889. doi: 10.7554/eLife.56889.
Siwei Zhang*, Hanwen Zhang*, Yifan Zhou*, Min Qiao*, Siming Zhao*, et al. Allele-specific open chromatin in human iPSC neurons elucidates functional disease variants. Science 369: 561-565 (2020). PMID: 32732423  * These authors contributed equally to this work.
Bojanek K, Zhu Y, MacLean J (2020) Cyclic transitions between higher order motifs underlie sustained asynchronous spiking in sparse recurrent networks. PLoS Comput Biol 16(9): e1007409. https://doi.org/10.1371/journal. pcbi.1007409
Vilmos Zsolnay, Harshwardhan H. Katkar, Steven Z. Chou, Thomas D. Pollard, and Gregory A. Voth, "Structural Basis for Polarized Elongation of Actin Filaments", Proc Natl Acad Sci U S A. 2020 Dec 1;117(48):30458-30464. doi: 10.1073/pnas.2011128117. Epub 2020 Nov 16.PMID: 33199648
Instagram Facebook Youtube